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Prof. (Dr.) Angshuman Bagchi

Prof. (Dr.) Angshuman Bagchi

Professor
  • Department: Department of Biochemistry and Biophysics
  • Phone Number: 2582-8750
  • Institutional E-Mail: angshu@klyuniv.ac.in
  • Web URL: https://www.researchgate.net/profile/Angshuman-Bagchi
  • Educational Qualifications:

    PhD in Computational Biology and Bioinformatics from Bose Institute, P-1/12, CIT Scheme VIIM, Kankurgachi, Kolkata- 700 054
    Took part in the ‘Biostatistics for Physicians: A short Course’ conducted by Indiana University School of Medicine, Indianapolis, IN, USA
    Postdoctoral Research Fellow in Center of Computational Biology and Bioinformatics, Department of Medical and Molecular Genetics, Indiana University Purdue University, Indianapolis, IN, USA
    Postdoctoral Research Fellow in Buck Institute for Age Research, 8001 Redwood Blvd., Novato, California-94945, USA
    Visiting research scientist in Department of Computer Science, Hong Kong Baptist University, Hong Kong
    Visiting research scientist in Virologie et Immunologie Moléculaires, Paris Saclay University, UR892, INRA Domaine de Vilvert, 78352 Jouy-en-Josas, France

  • Teaching Experience:

    1. Bioinformatics & Computational Biology
    2. General Biochemistry and Biophysics
    3. Life science for Engineers

  • Collaborative Programs

    With Prof. Anny Slama-Schwok, Virologie et Immunologie Moléculaires INRA UR892, Domaine de Vilvert, 78352 Jouy-en-Josas, France in the International Project titled “Advanced Methods for Viral Detection and Anti-viral Screening” funded by International Bio-Asia Project Campus France

  • Research Area:

    Computational Biology and Bioinformatics

  • Administrative Experiences

    Coordinator of DBT sponsored Bioinformatics Infrastructural Facility (BIF) Center, University of Kalyani

    Former Head, Department of Biochemistry and Biophysics, University of Kalyani

    As the coordinator of the BIF Center, the following activities were organized:

    Session 2025-2026
    National workshop on “AI-Driven Biology through application of Python Programming” during 18th to 21st of August 2025
    Total number of participants: 57

    Session 2023-2024
    National workshop on “Genomics through NGS and Bioinformatics with special reference to cancer” during 9th to 11th of September 2024
    Total number of participants: 50

    National workshop on “Avenues of Bioinformatics in the realm of Modern Biology-Chapter 2” on 20th of February 2024
    Total number of participants: 40

    National workshop on “Avenues of Bioinformatics in the realm of Modern Biology-Chapter 1” on 31st of January 2024
    Total number of participants: 21

    Session 2022-2023
    National workshop on “Basics of NGS Data Analysis” during 24th to 25th of August 2023
    Total number of participants: 45

    National workshop on “Bioinformatics in the post-Covid times” during 2nd to 3rd of March 2023
    Total number of participants: 15

    Session 2020-2021
    National Webinar on “Latest Trends in Bioinformatics” during 10th to 11th of June 2020
    Total number of participants: 30

    Session 2019-2020
    21 Day Summer Training on Bioinformatics during 2nd to 22nd July 2019
    Total number of participants: 33

    DBT Sponsored National Workshop on “Introduction to Bioinformatics from a students’ perspective” on 2nd of March 2020
    Total number of participants: 30

    One student was provided with “the Studentship” to be trained by me.
    Two students were provided with “the Traineeship” to work under my supervision.

    Session 2018-2019
    DBT Sponsored National Workshop on “Bioinformatics from sequence and structural perspective” during 11th to 13th of March 2019
    Total number of participants: 33

    One student was provided with “the Studentship” to be trained by me.

    Two students were provided with “the Traineeship” to work under my supervision.

    Various academic activities, like setting up of stalls, making presentations etc., were organized from the BIF center in the 3-day Academic Festival during 7th to 9th of February 2019 organized by the University of Kalyani.

    The BIF center was adjudged as the “Most Vibrant Center of the University” in the 3-day Academic Festival during 7th to 9th of February 2019

    Session 2017-2018
    DBT Sponsored National Workshop on “Structural applications on high throughput data analysis” during 20th to 21st of February 2018
    Total number of participants: 21

    One student was provided with “the Studentship” to be trained by Prof. Angshuman Bagchi, the coordinator

    Session 2015-2016
    DBT Sponsored National Workshop on “Introduction to Next Generation Sequencing” during 9th to 11th of November 2016
    Total number of participants: 30

    Session 2014-2015
    DBT Sponsored National Workshop on “In Silico Analyses of Mutation” on the 16th of December 2015
    Total number of participants: 45

  • List of Publications(Peer-Reviewed)

    https://www.ncbi.nlm.nih.gov/myncbi/angshuman.bagchi.3/bibliography/public/

  • Books Published / Book Chapters

    Attachment6
    BOOK
    Introduction to Bioinformatics, Angshuman Bagchi
    No of pages: 168
    Publisher: Narosa Publishing House, 22 Medical House Association Road, Daryaganj,
    New Delhi – 110002
    Year: 2018
    ISBN: 978-81-8487-632-1

    BOOK CHAPTERS
    Editor for the section titled “Prevention and Therapeutics of ROS Induced Cancer” of the book entitled “Handbook of Oxidative Stress in Cancer: Mechanistic Aspects” Springer, Singapore. ISBN 978-981-15-9410-6 (Print); ISBN 978-981-15-9411-3 (e-Book)
    Editor for the section titled “Bioinformatics And Systems Biology Insights” of the book entitled “Handbook of Oxidative Stress in Cancer: Therapeutic Aspects” Springer, Singapore. ISBN 978-981-16-1247-3 (Print); ISBN 978-981-16-1247-3 (Online)

    1. The roles of non-coding RNA-encoded functional peptides in gastrointestinal cancer– Invited article
    Jit Mondal, Dipanjan Guha, Sreekanya Roy, Anirban Nandy, Angshuman Bagchi (Corresponding author)
    Epigenetic Regulations in Gastrointestinal Cancers,
    Edited by Ganji Purnachandra Nagaraju, School of Medicine, Division of Hematology and Oncology, University of Alabama, Birmingham, AL, United States
    & Seema Kumari, Department of Biotechnology, Dr B.R. Ambedkar University, Srikakulam, Andhra Pradesh, India.
    Academic Press, 2026, 113-141, ISBN: 978-0-443-27765-8,
    DOI: 10.1016/C2024-0-03894-5
    2. Deciphering the crosstalk between single-cell sequencing and gastrointestinal cancer– Invited article
    Anirban Nandy, Sima Biswas, Sreekanya Roy, Angshuman Bagchi (Corresponding author)
    Epigenetic Regulations in Gastrointestinal Cancers,
    Edited by Ganji Purnachandra Nagaraju, School of Medicine, Division of Hematology and Oncology, University of Alabama, Birmingham, AL, United States
    & Seema Kumari, Department of Biotechnology, Dr B.R. Ambedkar University, Srikakulam, Andhra Pradesh, India.
    Academic Press, 2026, 153-165, ISBN: 978-0-443-27765-8,
    DOI: 10.1016/C2024-0-03894-5
     

    3. Protease and circRNA-targeted drug therapy in gastric cancer– Invited article
    Jit Mondal, Dipanjan Guha, Sreekanya Roy, Sima Biswas, Anirban Nandy and Angshuman Bagchi (Corresponding author)
    Therapeutic Aspects of Some Synthetic Compounds in Proteases-Induced Cancer- Vol2,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2025, 177-196, ISBN: 978-0-443-26635-5,
    DOI: 10.1016/C2023-0-52022-1

    4. Effects of natural products on proteases associated with cancers– Invited article
    Anirban Nandy, Sima Biswas, Sreekanya Roy, and Angshuman Bagchi (Corresponding author)
    Therapeutic Aspects of Some Synthetic Compounds in Proteases-Induced Cancer- Vol2,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2025, 19-27, 177-196, ISBN: 978-0-443-26635-5, DOI: 10.1016/C2023-0-52022-1

    5. Different ways of identification and characterization of proteases in cancer– Invited article
    Dipanjan Guha, Sreekanya Roy, Gaurav Kumar Bhagat, and Angshuman Bagchi (Corresponding author)
    Therapeutic Aspects of Some Synthetic Compounds in Proteases-Induced Cancer- Vol2,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2025, 221-234, ISBN: 978-0-443-26635-5,
    DOI: 10.1016/C2023-0-52022-1

    6. Caffeine and its potential use in Parkinson’s disease– Invited article
    Angshuman Bagchi, Sima Biswas
    Tea in Health and Disease Prevention,
    Edited by Victor R. Preedy, Department of Nutrition and Dietetics, Faculty of Life Sciences and Medicine, King’s College London, London, United Kingdom
    Department of Clinical Biochemistry, King’s College Hospital, London, United Kingdom
    & Vinood B. Patel, School of Life Sciences, University of Westminster, London, United Kingdom.
    Academic Press, 2024, 591-597, ISBN: 978-0-443-14158-4,
    DOI: 10.1016/C2022-0-02329-1

    7. Structural Aspects of Proteases in Cancer Therapeutics– Invited article
    Anirban Nandy, Sima Biswas and Angshuman Bagchi (Corresponding author)
    Handbook of Proteases in Cancer Therapeutic Aspect Vol.1,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    CRC Press, 2024, eBook ISBN: 9781003394693,
    DOI: https://doi.org/10.1201/9781003394693
     

    8. Associations of Proteases and Long Non-Coding RNAs in Cancer– Invited article
    Gaurav Kumar Bhagat, Dipanjan Guha and Angshuman Bagchi (Corresponding author)
    Handbook of Proteases in Cancer Therapeutic Aspect Vol.1,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    CRC Press, 2024, eBook ISBN: 9781003394693,
    DOI: https://doi.org/10.1201/9781003394693
     

    9. Principles of computational drug designing and drug repurposing–an algorithmic approach– Invited article
    Angshuman Bagchi
    Computational Methods in Drug Discovery and Repurposing for Cancer Therapy,
    Edited by Ganji Purnachandra Nagaraju, Department of Hematology and Oncology, School of Medicine, University of Alabama, Birmingham, AL, United States,
    Venkatesan Amouda, Department of Bioinformatics, Pondicherry University, Puducherry, India,
    & Ampasala Dinakara Rao, Department of Bioinformatics, Pondicherry University, Puducherry, India
    Academic Press, 2023, 129-146, ISBN: 978-0-443-15280-1,
    DOI: 10.1016/C2022-0-01523-3

    10. Network pharmacology-based identification of potential inhibitor(s) against phospholipase A2– Invited article
    Angshuman Bagchi
    Phospholipases in Physiology and Pathology, Vol.6,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2023, 211-218, ISBN: 978-0-323-95687-1,
    DOI: 10.1016/C2021-1-02265-9

    11. Role of phospholipases in neurodegenerative disorders– Invited article
    Sima Biswas and Angshuman Bagchi (Corresponding author)
    Phospholipases in Physiology and Pathology, Vol.7,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2023, 189-199, ISBN: 978-0-323-95687-1,
    DOI: 10.1016/C2021-1-02265-9

    12. Relationship between phospholipases and LncRNAs during the onset of diseases– Invited article
    Gaurav Kumar Bhagat and Angshuman Bagchi (Corresponding author)
    Phospholipases in Physiology and Pathology, Vol.4,
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2023, 429-441, ISBN: 978-0-323-95687-1,
    DOI: 10.1016/C2021-1-02265-9

    13. Protein-protein interaction mapping of phospholipase – Invited article
    Ananya Samanta, Semanti Ghosh and Angshuman Bagchi (Corresponding author)
    Phospholipases in Physiology and Pathology, Vol. 6, Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2023, 199-210, ISBN: 978-0-323-95687-1,
    DOI: 10.1016/C2021-1-02265-9

    14. Involvements of phospholipases in Mst pathway regulation
    Tanusree Mookherjee, Angshuman Bagchi (Corresponding author), Rita Ghosh
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Academic Press, 2023, 211-219, ISBN: 978-0-323-95687-1,
    DOI: 10.1016/C2021-1-02265-9

    15. Molecular Analysis of the Involvements of lncRNA in Cancer Development– Invited article
    Angshuman Bagchi
    Handbook of Oxidative Stress in Cancer: Mechanistic Aspects.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India
    Bimal K. Ray, Department of Veterinary Pathobiology, University of Missouri, Columbia, MO, USA
    & Susanta Roychoudhury, CSIR-Indian Institute of Chemical Biology, Kolkata, India
    Springer, Singapore, 2022, 2295-2308, Print ISBN978-981-15-9410-6
    Online ISBN978-981-15-9411-3
    DOI:10.1007/978-981-15-9411-3_153

    16. Molecular Insights into the Roles of E3-Ligases in ROS-Mediated Cancer from a Bioinformatics Perspective– Invited article
    Sima Biswas and Angshuman Bagchi (Corresponding author)
    Handbook of Oxidative Stress in Cancer: Mechanistic Aspects.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India
    Bimal K. Ray, Department of Veterinary Pathobiology, University of Missouri, Columbia, MO, USA
    & Susanta Roychoudhury, CSIR-Indian Institute of Chemical Biology, Kolkata, India
    Springer, Singapore, 2022, 2249-2263, Print ISBN: 978-981-15-9410-6
    Online ISBN: 978-981-15-9411-3
    DOI:10.1007/978-981-15-9411-3_153

    17. Application of Bioinformatics Databases in the Study of Oxidative Stress Related Cancers– Invited article
    Angshuman Bagchi (Corresponding author) and Gaurav Kumar Bhagat
    Handbook of Oxidative Stress in Cancer: Therapeutic Aspects.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Springer, Singapore, 2022, 3229-3240, Print ISBN:978-981-16-5421-3
    Online ISBN: 978-981-16-5422-0
    DOI: 10.1007/978-981-16-1247-3_135-1
     

    18. An Overview of In Silico Drug Discovery with Emphasis on Cancer– Invited article
    Sima Biswas and Angshuman Bagchi (Corresponding author)
    Handbook of Oxidative Stress in Cancer: Therapeutic Aspects.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Springer, Singapore, 2022, 3215-3227, Print ISBN:978-981-16-5421-3
    Online ISBN: 978-981-16-5422-0
    DOI: 10.1007/978-981-16-1247-3_135-1

    19. A Critical approach in the Analysis of lncRNA characteristics for Cancer Therapy– Invited article
    Angshuman Bagchi (Corresponding author) and Gaurab Kumar Bhagat
    Handbook of Oxidative Stress in Cancer: Therapeutic Aspects.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Springer, Singapore, 2022, 1511-1523, Print ISBN:978-981-16-5421-3
    Online ISBN: 978-981-16-5422-0
    DOI: 10.1007/978-981-16-1247-3_135-1

    20. Elucidation of Possible Role of Heat Shock Protein as Potent Therapeutic Agent in ROS-Mediated Cancer and Its Assessment Through Computational Biology Methods.
    Sangeeta Mitra, Angshuman Bagchi (Corresponding author), Rakhi Dasgupta
    Handbook of Oxidative Stress in Cancer: Therapeutic Aspects.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Springer, Singapore, 2022, 3199-3213, Print ISBN:978-981-16-5421-3
    Online ISBN: 978-981-16-5422-0
    DOI: 10.1007/978-981-16-1247-3_135-1

    21. Drugging Protein-Protein Interaction Interface with Natural Products: A Computational Approach– Invited article
    Ria Biswas and Angshuman Bagchi (Corresponding author)
    Bioactive Natural products in Drug Discovery.
    Edited by Joginder Singh, Department of Microbiology, Lovely Professional University, Phagwara, Punjab, India.
    Vineet Meshram, Department of Plant Pathology and Weed Research, Agricultural Research Organization, The Volcani Centre, Rishon Lezion, Israel
    & Mahiti Gupta, Department of Biotechnology, Lovely Professional University, Phagwara, Punjab, India
    Springer, Singapore, 2020, 281-301, Hardcover ISBN: 978-981-15-1393-0
    Softcover ISBN: 978-981-15-1396-1, eBook ISBN: 978-981-15-1394-7
    DOI: 10.1007/978-981-15-1394-7
     

    22. Role of Noncoding RNA in lung cancer– Invited article
    Angshuman Bagchi
    Oxidative stress in lung diseases, Vol. 2
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    Narasimham L. Parinandi Department of Internal Medicine The Ohio State University Columbus, OH, USA
    Rita Ghosh Department of Biochemistry and Biophysics University of Kalyani Kalyani, West Bengal, India
    Nirmal K. Ganguly Apollo Hospitals Educational & Research Foundation (AHERF) Indraprastha Apollo Hospitals New Delhi, Delhi, India
    & Tapati Chakraborti Department of Biochemistry and Biophysics University of Kalyani Kalyani, West Bengal, India
    Springer, Singapore, 2020, 353-362, ISBN: 978-981-32-9365-6,
    ISBN: 978-981-32-9366-3 (eBook)
    DOI:10.1007/978-981-32-9366-3

    23. Structural interactions between H-NS and IHF with DNA
    Angshuman Bagchi
    Methodologies and Application Issues of Contemporary Computing Framework.
    Edited by Jyotsna Kumar Mandal, Department of Computer Science and Engineering University of Kalyani Kalyani, West Bengal, India
    Somnath Mukhopadhyay, Department of Computer Science and Engineering Assam University Silchar, Assam, India
    Paramartha Dutta, Department of Computer and System Sciences Visva-Bharati University Santiniketan, West Bengal, India
    & Kousik Dasgupta, Department of Computer Science and Engineering Kalyani Government Engineering College Kalyani, West Bengal, India
    Springer, Singapore, 2018, 1-12, ISBN: 978-981-13-2344-7,
    ISBN 978-981-13-2345-4 (eBook)
    DOI: 10.1007/978-981-13-2345-4

    24. Protein-protein Interactions: Basics, Characteristics, and Predictions– Invited article
    Angshuman Bagchi
    Soft Computing for Biological Systems.
    Edited by Hemant J. Purohit, Environmental Biotechnology and Genomics Division, CSIR-National Environmental Engineering Research Institute (NEERI), Nagpur, Maharashtra, India
    Vipin Chandra Kalia, Microbial Biotechnology and Genomics, CSIR-Institute of Genomics and Integrative Biology (IGIB) Delhi University Campus, Delhi, India
    & Ravi Prabhakar More, ADBS, Lab 18, Neural Stem Cell Program, TIFR-National Centre for Biological Sciences, Bangalore, Karnataka, India
    Springer, Singapore, 2018, 111-120, Print ISBN: 978-981-10-7454-7,
    Online ISBN: 978-981-10-7455-4
    DOI: 10.1007/978-981-10-7455-4_7
     
    25. Protease-Antiprotease Interactions: An Overview of the Process from an “In Silico” Perspective– Invited article
    Angshuman Bagchi
    Proteases in Physiology and Pathology.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    & Naranjan S. Dhalla, St. Boniface Hospital Research Centre, University of Manitoba, Faculty of Health Sciences, College of Medicine, Institute of Cardiovascular Sciences, Manitoba, Winnipeg, Canada
    Springer, Singapore, 2017, 475-484, Print ISBN: 978-981-10-2512-9,
    Online ISBN: 978-981-10-2513-6,
    DOI: 10.1007/978-981-10-2513-6_22

    26. A Review on the Mode of the Interactions of Bacterial Proteases with Their Substrates
    Sanchari Bhattacharjee, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author)
    Proteases in Physiology and Pathology.
    Edited by Sajal Chakraborti, Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
    & Naranjan S. Dhalla, St. Boniface Hospital Research Centre, University of Manitoba, Faculty of Health Sciences, College of Medicine, Institute of Cardiovascular Sciences, Manitoba, Winnipeg, Canada
    Springer, Singapore, 2017, 527-548, Print ISBN: 978-981-10-2512-9,
    Online ISBN: 978-981-10-2513-6,
    DOI: 10.1007/978-981-10-2513-6_25

    27. Introduction to Molecular Computation: Theory and Applications – DNA and Membrane Computing– Invited article
    Angshuman Bagchi
    Handbook of Research on Natural Computing for Optimization Problems
    Jyotsna Kumar Mandal, Department of Computer Science and Engineering University of Kalyani Kalyani, West Bengal, India
    Somnath Mukhopadhyay, Calcutta Business School, Calcutta
    & Tandra Pal, NIT, Durgapur
    IGI-Global, 719-743, 2016, ISBN13: 9781522500582,
    EISBN13: 9781522500599
    DOI: 10.4018/978-1-5225-0058-2

    28. Cellular Automata – Basics, Applications in Problem Solving– Invited article
    Simanti Bhattacharya and Angshuman Bagchi (Corresponding author)
    Handbook of Research on Natural Computing for Optimization Problems
    Jyotsna Kumar Mandal, Department of Computer Science and Engineering University of Kalyani Kalyani, West Bengal, India
    Somnath Mukhopadhyay, Calcutta Business School, Calcutta
    & Tandra Pal, NIT, Durgapur
    IGI-Global, 619-636, 2016, ISBN13: 9781522500582,
    EISBN13: 9781522500599
    DOI: 10.4018/978-1-5225-0058-2

    29. Overview of Cellular Computing-Basic Principles and Applications
    Amit Das, Rakhi Dasgupta, Angshuman Bagchi (Corresponding author)
    Handbook of Research on Natural Computing for Optimization Problems
    Edited by Jyotsna Kumar Mandal, Department of Computer Science and Engineering University of Kalyani Kalyani, West Bengal, India
    Somnath Mukhopadhyay, Calcutta Business School, Calcutta
    & Tandra Pal, NIT, Durgapur
    IGI-Global, 637-663, 2016, ISBN13: 9781522500582,
    EISBN13: 9781522500599
    DOI: 10.4018/978-1-5225-0058-2

    30. Structural insights into IbpA-IbpB interactions to Predict their roles in heat shock response
    Sanchari Bhattacharjee, Rakhi Dasgupta, and Angshuman Bagchi (Corresponding author)
    Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics
    Edited by Naresh Babu Muppalaneni, C.R. Rao Advan Inst of Mat,Stat and Comp Sci, Hyderabad, India
    & Vinit Kumar Gunjan, Annamacharya Institute of Technology and Sciences, Kadapa, India
    Springer, Singapore, 41-51, 2014, Print ISBN:978-981-287-259-3,
    Online ISBN: 978-981-287-260-9
    DOI:10.1007/978-981-287-260-9_4

    31. Analysis of the Structural Details of DsrO Protein from Allochromatium vinosum to Identify the Role of the Protein in the Redox Transport Process Through the dsr Operon
    Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics
    Semanti Ghosh and Angshuman Bagchi (Corresponding author)
    Edited by Naresh Babu Muppalaneni, C.R. Rao Advan Inst of Mat,Stat and Comp Sci, Hyderabad, India
    & Vinit Kumar Gunjan, Annamacharya Institute of Technology and Sciences, Kadapa, India
    Springer, Singapore, 1-10, 2014, Print ISBN:978-981-287-259-3,
    Online ISBN: 978-981-287-260-9
    DOI: 10.1007/978-981-287-260-9_1
     

    32. LCMV Interaction Changes with T192M Mutation in Alpha-Dystroglycan
    Simanti Bhattacharya, Sanchari Bhattacharjee, Prosun Kumar Biswas, Amit Das, Rakhi Dasgupta and Angshuman Bagchi (Corresponding author)
    Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics
    Edited by Naresh Babu Muppalaneni, C.R. Rao Advan Inst of Mat,Stat and Comp Sci, Hyderabad, India
    & Vinit Kumar Gunjan, Annamacharya Institute of Technology and Sciences, Kadapa, India
    Springer, Singapore, 11-23, 2014, Print ISBN:978-981-287-259-3,
    Online ISBN: 978-981-287-260-9
    DOI: 10.1007/978-981-287-260-9_2

    33. Structural and Functional Characterization of Arabidopsis thaliana WW Domain Containing Protein F4JC80
    Amit Das, Simanti Bhattacharya, Angshuman Bagchi (Corresponding author), Rakhi Dasgupta
    Springer Briefs in Applied Sciences and Technology: Computational Intelligence in Medical Informatics
    Edited by Naresh Babu Muppalaneni, C.R. Rao Advan Inst of Mat,Stat and Comp Sci, Hyderabad, India
    & Vinit Kumar Gunjan, Annamacharya Institute of Technology and Sciences, Kadapa, India
    Springer, Singapore, 25-39, 2014, Print ISBN:978-981-287-259-3,
    Online ISBN: 978-981-287-260-9
    DOI: 10.1007/978-981-287-260-9_1

    34. Prediction of Protein–Protein Interactions, Chapter 15 – Invited article
    Angshuman Bagchi
    Computational Intelligence and Pattern Analysis in Biological Informatics
    Editor(s): Ujjwal Maulik, Sanghamitra Bandyopadhyay, Jason T. L. Wang
    John Wiley & Sons, Hoboken, NJ, USA. doi: 10.1002/9780470872352; ISBN: 978-0-470-58159-9

  • Invited Lecture / Session Chaired

    Invited Talks
    “Peptides from non-coding RNAs in disease development” at the webinar organized by the Society of Biological Chemists (India) Kolkata Chapter, on 10.06.2026 at 20:00 hours

    “Interdisciplinary Bioinformatics through R-programming” at the 3-Days Hands On Workshop on R for Life Sciences & Physical Sciences, organized by Department of Botany, Department of Mathematics, Department of Sericulture, Raiganj University, Raiganj, West Bengal, during 2nd to 4th of June, 2026

    “Computational analyses of circular RNAs and long non-coding RNAs and their derived peptides/proteins in diseases” at the Rare Disease CoP Meeting, organized by the Rare Disease Community of Practice by the African Bioinformatics Institute (ABI), University of Cape Town, South Africa, on 28th of May 2026

    “Bioinformatics the new Frontiers in Interdisciplinary Science” at the Workshop on “DECODING LIFE: A BASIC INSIGHT INTO BIOINFORMATICS”, organized by the PG Department of Botany, Lady Brabourne College In collaboration with IQAC, Lady Brabourne College, Kolkata during 12th to 13th of May 2026

    “Bioinformatics in the era of genomics” at the Seminar organized for the celebration of National Technology Day, organized by the Department of Microbiology and Biotechnology, School of Life Sciences, Swami Vivekananda University, West Bengal, India, on 11th May 2026

    “Proteins encoded by ‘non-coding’ RNAs-new determinants of disease pathways” at the One Day Seminar on “Latest Developments in Medical Biotechnology”, organized by Department of Medical Biotechnology, Sikkim Manipal University, Sikkim, on 8th April, 2026

    “Overview of Bioinformatics and AI/ML” at the National Workshop on “Exploring Bioinformatics: Tools, Techniques and Research Applications”, organized by the Bioinformatics and Computational Biology Centre, Sponsored by the Department of Biotechnology, Govt. of India, Assam University, Silchar – 788011, Assam, India, during 5th to 11th of February 2026

    Invited by the national Institute of Biomedical Genomics (BRIC-NIBMG) to serve as the judge for the Poster Presentation Competition on occasion of the celebration of the Foundation Day of the Institute on 24th of February, 2026

    “Non-coding RNAs & their protein products – new players in disease onsets” at the Computational Biology Conference 2.0 (CBC 2.0) organized by Indian Biological Data Centre, Regional Centre for Biotechnology, Faridabad, Haryana, India, during 8th to 10th December, 2025.
    Also acted as the session chair

    Special Mention

    Invited by the South Point High School, Kolkata to provide popular lectures titled “Bioinformatics and AI/ML- the current trends in Interdisciplinary Science” for their students on 27.10.2025 and 29.10.2025

    “Non-coding RNAs-new players in disease developments” Extension Lecture, organized by Department of Microbiology, Ramakrishna Mission Vidyamandira, Belur Math, Howrah, West Bengal, India, on 26th of July, 2025

    “Application of molecular modelling and docking studies in Biology” at the “5-Day workshop on Revolutionizing Healthcare with AI: Computational Biology and Computer Vision in Medical Diagnostics” organized by Department of Computer Science and Engineering SRM University- AP, Andhra Pradesh, India, during 28th April to 2nd May, 2025

    “Protein products from the so-called non-coding RNAs-new players as disease biomarkers” – Plenary Lecture at the “International Seminar on ‘From Genome to Organism: Part IV” organized by the Department of Zoology and Department of Biotechnology, Sidho-Kanho-Birsha University, West Bengal, India, during 5th to 6th of March 2025

    “Prediction of protein-protein interactions using machine learning based approaches” at the “Recent Advances in Interdisciplinary Science & Research (RAISR-2025)”, organized by the Department of Physics, in collaboration with the Department of Biosciences, Chemistry and Pharmacy, JIS University, Kolkata, West Bengal, on National Science Day-28th of February 2025.

    “Molecular modelling and dynamics simulations of proteins” at the “Workshop Series on Computer Aided Drug Designing (CADD), Part III: Introduction to QSAR and Molecular Dynamics Simulation”, organized by the Bioinformatics and Computational Biology Centre, Sponsored by the Department of Biotechnology, Govt. of India, Assam University, Silchar – 788011, Assam, India, during 21st to 25th of February 2025

    “Analyses of proteins/peptides encoded by the so-called non-coding RNAs-new players as biomarkers in diseases”- Keynote Lecture at the “International conference on Pharmaceutics and Drug Delivery Systems”, organized by Genvio group during 26th to 27th of November 2024.

    “Application of Machine Learning in prediction of protein-protein interactions”- at the “DBS Seminar Series” organized by Department of Biological Sciences, IISER-Kolkata, on 18th of September 2024

    “Molecular Modelling and Docking Simulations of Protein Complex” – at the “International Conference on Advancing Science and Technologies in Health Science (IEM-HEALS 2024)” during 13th to 15th of September 2024 organized by the Department of Basic Science & Humanities, Institute of Engineering & Management – Salt Lake (School of University of Engineering and Management, Kolkata, India)

    “Bioinformatics in Health Care Sector” – at the “5 Days Faculty Development Programme” on Bioinformatics and Computational Biology Approaches in Present Day Research organized by the Department of Biotechnology, University of Engineering and Management (UEM), Kolkata – 700160, West Bengal, India during 6th to 10th of November 2023 (acted as one of the Resource Persons)

    “Analyses of the features of non-coding RNAs (ncRNAs) & their peptide products to predict their modes of involvements in disease conditions” – at the “International Conference on Scientific Advances in Life Sciences, Agriculture And Food & Nutrition (ICSA 2023)” organized by the Swami Vivekananda University, West Bengal- 700121 during 28th to 30th of September 2023

    “Analyses of the features of non-coding RNAs (ncRNAs) to predict their modes of involvements in disease conditions” – at the “International Biophysics Week Celebration 2023” by the Gāṅgeya Student Chapter from IISER, Kolkata, and Biophysical Society, on 24th of March 2023

    “Promoting Research Excellence in Academics across West Bengal” – A Virtual Workshop organized by West Bengal State Council of Higher Education in association with Elsevier on 16th of August 2022

    “Overview of Docking” virtual Faculty development program on “Molecular Docking and Simulation” organized by the Padmashree Institute of Management and Science, Kommagatta, Kengeri, Bengaluru, Karnataka 560060 on 4th of July 2021

    “Overview of Molecular Modelling” virtual Faculty development program on “Molecular Docking and Simulation” organized by the Padmashree Institute of Management and Science, Kommagatta, Kengeri, Bengaluru, Karnataka 560060 on 30th of June 2021

    “Bioinformatics and National Center for Biotechnology Information (NCBI)” at the “Webinar on Bioinformatics and protein characterization” organized by the Padmashree Institute of Management and Science, Kommagatta, Kengeri, Bengaluru, Karnataka 560060 during 6th to 10th of July 2020

    “Protein functional sites” at the “Webinar on Bioinformatics and protein characterization” organized by the Padmashree Institute of Management and Science, Kommagatta, Kengeri, Bengaluru, Karnataka 560060 during 6th to 10th of July 2020

    “Bioinformatics and it’s applications” at the “2-day online Workshop and Hands-on Training” Organized by the Maulana Abul Kalam Azad University of Technology, West Bengal, Haringhata Campus, West Bengal, India, during 10th to 11th of September 2020

    “Prediction of the mechanism of the catalysis of environmental sulfur compounds by dsr operon-A Bioinformatics Approach” at the “International Webinar on Catalysis Virtual Summit 2020” organized by Iris Scientific Group, https://irisscientificgroup.com/conferences/catalysis-and-chemical-science/webinar/home/ during 29th to 30th August 2020.

    “Introduction to Biological Sequence Alignment” at the “A National Workshop and Hands-on Training on ‘Computational Biology with Modern Tools’ ”, during 17th to 21st June 2019, Organized by the Maulana Abul Kalam Azad University of Technology, West Bengal, Haringhata Campus, West Bengal, India

    “Bioinformatics Infrastructure Facility Center- A Central Facility of the University” at the “XXVIII Annual Bioinformatics Coordinators Meeting”, during 3rd to 4th February 2017, at the ACTREC, TMC, Kharghar, Navi-Mumbai-410210, India

    “Structural Bioinformatic study of sulfur compound metabolizing sox operon” at the “3rd International Conference on Public Mental Health and Neurosciences ICPMN-2016”, during 14th to 15th December 2016, at the Jain University, Bangalore, India

    “Computational Aspects of Bio-molecular Interactions” in “VIM Work in Progress”, on 22nd of March 2016, at the Virologie et Immunologie Moléculaires, Paris Saclay University, UR892, INRA Domaine de Vilvert, 78352 Jouy-en-Josas

    “Prediction of Protein-protein interactions by machine learning” at the “2nd International Conference on Public Mental Health and Neurosciences ICPMN-2015”, during 9th to 10th of December 2015, at Jyoti Nivas College, Bangalore, India

    “Insight into Duchenne Muscular Dystrophy from the analyses of the Dystrophin protein and the mutations therein” at the “International Conference on Informatics & Integrative Biology”, during 17th to 19th of December 2014, at Bioinformatics Centre, Bose Institute, Kolkata, India

    “Structural Bioinformatic Study of Sulfur Compound Metabolizing sox operon” at the “A five-day National Workshop on Use of Recombinant DNA in Modern Biotechnological Research” during 17th to 21st of December 2013, at the Biotechnology Department, National Institute of Technology, Durgapur

    “Homology modeling of a dimeric repressor protein SoxR and analysis of its dimeric interface” (Tutorial) at the “DBT Sponsored National Workshop on To Predict and Model Biological Molecules and System”, during 16th to 18th of March 2011, at the Department of Biochemistry and Biophysics, University of Kalyani

    “Molecular modeling of protein interactions in the sox operon”, at the Pittsburgh Supercomputing Center, Pittsburgh, Pennsylvania, USA on 4th of April 2010

    “Prediction of protein-protein interactions”, at the Department of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, North Carolina, USA on 22nd of April 2009

    “Structural biology of sulfur bacteria (Sox)”, at the Max Planck Institute for Molecular Genetics – Ihnestraße 73 – 14195 Berlin, on 22nd of January 2008

    Interactions with media for popularization of Bioinformatics
    Invited by Yuvbani, PRASAR BHARATI, Akashvani, Kolkata as an expert and guest for the programme titled “Taruner Sapno”, aired on 12.06.2026 from 11:00 hours (IST)

    Invited by Yuvbani, PRASAR BHARATI, Akashvani, Kolkata as an expert and guest for the programme titled “Peshar Sandhane”, aired on 07.12.2025 from 17:50 hours (IST)

    Invited by PRASAR BHARATI, Akashvani, Kolkata as an expert and guest for the programme titled “Title: TALK FOR SCIENCE MAGAZINE ANWESHA”, aired on 31.07.2025 from 20:30 hours (IST)

    Invited by PRASAR BHARATI, Akashvani, Kolkata as an expert and guest for the programme titled “ANWESHA: Topic: Interview for science magazine ANWESHA on Bioinformatics” on 14th of May 2024, aired on 16.05.2024 from 20:30 hours (IST)

    Invited by Doordarshan Kendra, Kolkata (DD-Bangla) as an expert and guest for the programme titled “BIGYAN PRASANGE: Topic: BIOTECHNOLOGY NIYE GABESHANA” on 6th of March 2024
    YouTube link: https://www.youtube.com/live/24gvkrPzL_s?feature=shared

Membership of Learned Societies

Life Member of Society of Biological Chemists, India; Membership ID: 4937

Former member of the International Society for Computational Biology (ISCB)

 ORCID ID 0000-0003-4611-4663 Google Scholar ID https://scholar.google.com/citations?hl=en&user=aQ5JQ3UAAAAJ
Research Highlights/Photo gallery